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View Structure Prediction Details

Protein: SBT33_ARATH
Organism: Arabidopsis thaliana
Length: 777 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SBT33_ARATH.

Description E-value Query
Range
Subject
Range
SBT38_ARATH - Subtilisin-like protease SBT3.8 OS=Arabidopsis thaliana GN=SBT3.8 PE=3 SV=1
579.0 [0..1] [777..1]

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Predicted Domain #1
Region A:
Residues: [1-118]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSFRSSILL VLLSLITVLN ATRARSETES KVHIVYLGEK KHHDPEFVTE SHHQMLASLL  60
   61 GSKKDADDSM VYSYRHGFSG FAAKLTKSQA KKIADLPEVV HVIPDGFHEL ATTRTWEY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 34.39794
Match: 2p4eP
Description: No description for 2p4eP was found.

Predicted Domain #2
Region A:
Residues: [119-777]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LGLSSANPKN LLNDTNMGDQ VIIGVIDTGV WPESESFNDN GVGPIPRKWK GGCESGENFR  60
   61 STDCNRKLIG AKYFINGFLA ENKGFNTTES RDYISARDFD GHGTHVASIA GGSFVPNVSY 120
  121 KGLAGGTLRG GAPRARIAMY KACWFHEELK GVTCSDSDIM KAIDEAIHDG VDVLSISLVG 180
  181 QIPLNSETDI RDEFATGLFH AVAKGIVVVC AGGNDGPAAQ TVVNIAPWIL TVAATTLDRS 240
  241 FPTPITLGNN KVILGQATYT GPELGLTSLV YPENARNNNE TFSGVCESLN LNPNYTMAMK 300
  301 VVLCFTASRT NAAISRAASF VKAAGGLGLI ISRNPVYTLS PCNDDFPCVA VDYELGTDIL 360
  361 SYIRSTRSPV VKIQRSRTLS GQPVGTKVVN FSSRGPNSMS PAILKPDIAA PGVRILAATS 420
  421 PNDTLNVGGF AMLSGTSMAT PVISGVIALL KALHPEWSPA AFRSAIVTTA WRTDPFGEQI 480
  481 FAEGSSRKVS DPFDYGGGIV NPEKAAEPGL IYDMGPQDYI LYLCSAGYND SSISQLVGQI 540
  541 TVCSNPKPSV LDVNLPSITI PNLKDEVTLT RTVTNVGLVD SVYKVSVEPP LGVRVVVTPE 600
  601 TLVFNSKTIS VSFTVRVSTT HKINTGYYFG SLTWTDSVHN VVIPLSVRTQ ILQNYYDEN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 46.0
Match: 1xf1A
Description: Structure of C5a peptidase- a key virulence factor from Streptococcus
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle