YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: DTX31_ARATH
Organism: Arabidopsis thaliana
Length: 522 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DTX31_ARATH.

Description E-value Query
Range
Subject
Range
gi|113548993, gi... - gi|115453843|ref|NP_001050522.1| Os03g0571900 [Oryza sativa (japonica cultivar-group)], gi|113548993...
330.0 [0..21] [514..599]

Back

Predicted Domain #1
Region A:
Residues: [1-279]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKDNDFKDP FLASTEEEEL DPATQKALME YLGVGSRASS LVSFSSTAVD IPPISGVGDF  60
   61 VREFRIESRK LWKLAGPAIF TTMSQYSLGA VTQVFAGHIS TLALAAVSIE NSVIAGFSFG 120
  121 IMLGMGSALE TLCGQAFGAG KVSMLGVYLQ RSWVILSVTA LFLSLIYIFA APILTFIGQT 180
  181 AAISAMAGIF SIYMIPQIFA YAINFPTAKF LQSQSKIMVM AGISGVVLVI HSFFTWLVMS 240
  241 RLHWGLPGLA LVLNTSWWVI VVAQLVYIFN CTCGEAWSG

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 34.677781
Match: PF01554.9
Description: No description for PF01554.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [280-522]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FTWEAFHNLW GFVKLSLASA AMLCLEIWYF MALVLFAGYL KNAEVSVAAL SICMNILGWA  60
   61 AMVAFGTNAA VSVRVSNELG ASHPRTAKFS LVVAVILSTA IGMFIAAGLL FFRNEYPVLF 120
  121 VEDEEVRNVV RELTPMLAFC IVINNVQPVL SGVAVGAGWQ AVVAYVNIAC YYLFGVPFGL 180
  181 LLGFKLEYGV MGIWWGMVTG TFVQSIVLTW MICKTNWEKE ASMAEERIKE WGGVPAEKET 240
  241 LLN

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 41.552842
Match: PF01554.9
Description: No description for PF01554.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle