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View Structure Prediction Details

Protein: STAD5_ARATH
Organism: Arabidopsis thaliana
Length: 396 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for STAD5_ARATH.

Description E-value Query
Range
Subject
Range
gi|951427 - gi|951427|gb|AAA74692.1| stearoyl-acyl-carrier protein desaturase
644.0 [0..1] [395..17]

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Predicted Domain #1
Region A:
Residues: [1-396]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMAMDRIVF SPSSYVYRPC QARGSRSSRV SMASTIRSAT TEVTNGRKLY IPPREVHVQV  60
   61 KHSMPPQKLE IFKSLEGWAD ETLLTYLKPV EKSWQPTDFL PEPESEGFYD QVKELRERCK 120
  121 ELPDDYFVVL VGDMITEEAL PTYQTMLNTL DGVRDETGAS PTPWAIWTRA WTAEENRHGD 180
  181 LLNKYLYLSG RVDMRQIEKT IQYLIGSGMD PKTENNPYLG FIYTSFQERA TFISHGNTAR 240
  241 LAKDRGDLKL AQICGTIAAD ERRHETAYTK IVEKLFEIDP DGTILGLADM MKKKISMPAH 300
  301 LMYDGQDDNL FEHFSTVAQR LGVYTAKDYA DILEFLVERW NVETLTDLSS EGHRAQDFVC 360
  361 GLPARIRKIE ERAQGRAKEA AKNIPFSWIF GRNIRA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 175.0
Match: 1oq4A
Description: delta 9-stearoyl-acyl carrier protein desaturase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle