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View Structure Prediction Details

Protein: PLT3_ARATH
Organism: Arabidopsis thaliana
Length: 508 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PLT3_ARATH.

Description E-value Query
Range
Subject
Range
gi|49527412 - gi|49527412|emb|CAG61052.1| unnamed protein product [Candida glabrata]
gi|50291337, gi|... - gi|50291337|ref|XP_448101.1| unnamed protein product [Candida glabrata], gi|49527412|emb|CAG61052.1|...
265.0 [0..11] [507..108]

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Predicted Domain #1
Region A:
Residues: [1-508]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVHADGHNFP GSDPNPHMNK FAFGCAIVAS IISIIFGYDT GVMSGAQIFI RDDLKINDTQ  60
   61 IEVLAGILNL CALVGSLTAG KTSDVIGRRY TIALSAVIFL VGSVLMGYGP NYPVLMVGRC 120
  121 IAGVGVGFAL MIAPVYSAEI SSASHRGFLT SLPELCISLG ILLGYVSNYC FGKLTLKLGW 180
  181 RLMLGIAAFP SLILAFGITR MPESPRWLVM QGRLEEAKKI MVLVSNTEEE AEERFRDILT 240
  241 AAEVDVTEIK EVGGGVKKKN HGKSVWRELV IKPRPAVRLI LIAAVGIHFF EHATGIEAVV 300
  301 LYSPRIFKKA GVVSKDKLLL ATVGVGLTKA FFIIIATFLL DKVGRRKLLL TSTGGMVFAL 360
  361 TSLAVSLTMV QRFGRLAWAL SLSIVSTYAF VAFFSIGLGP ITWVYSSEIF PLRLRAQGAS 420
  421 IGVAVNRIMN ATVSMSFLSM TKAITTGGVF FVFAGIAVAA WWFFFFMLPE TKGLPLEEME 480
  481 KLFGGGGPRG DRDGLEIQTK TISIGGFS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.39794
Match: 1pw4A
Description: Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle