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View Structure Prediction Details

Protein: gi|25411581, gi|...
Organism: Arabidopsis thaliana
Length: 252 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|25411581, gi|....

Description E-value Query
Range
Subject
Range
gi|11762212, gi|... - gi|18418319|ref|NP_567940.1| peroxisomal membrane protein 22 kDa, putative [Arabidopsis thaliana], g...
284.0 [0..1] [250..1]

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Predicted Domain #1
Region A:
Residues: [1-164]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRALFRNVA VDTARLIRRN AAASTDQYGK TGVAQSRPYF RSRQLLERAK ETGVSPSPSL  60
   61 GFSSSSSPSR IGFVGWYLGM VKSHPVVTKS VTSSLIYIAA DLSSQTIAKT SSESYDLVRT 120
  121 ARMGGYGLFV LGPTLHYWFN FMSRLFPKQD LITTFKKMAM GQTI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [165-252]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YGPIMTVIFF SLNASLQGER GSVILARLKR DLLPALFNGV MYWPLCDFIT FRFFPVHLQP  60
   61 LVSNSFSYVW TIYMTYMANR EKPVAIST

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 6.568636
Match: PF04117.2
Description: No description for PF04117.2 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.840 N/A N/A a.52.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle