| Protein: | MBD9_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 2176 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
No multiple sequence alignment data found for MBD9_ARATH.
|
Region A: Residues: [1-180] |
1 11 21 31 41 51
| | | | | |
1 MEPTDSTNEQ LGDTKTAAVK EESRSFLGID LNEIPTGATL GGGCTAGQDD DGEYEPVEVV 60
61 RSIHDNPDPA PGAPAEVPEP DRDASCGACG RPESIELVVV CDACERGFHM SCVNDGVEAA 120
121 PSADWMCSDC RTGGERSKLW PLGVKSKLIL DMNASPPSDA EGYGAEETSD SRKHMLASSS 180
181
|
| Detection Method: |  |
| Confidence: | 15.30103 |
| Match: | 2e6rA |
| Description: | No description for 2e6rA was found. |
|
Region A: Residues: [181-344] |
1 11 21 31 41 51
| | | | | |
1 CIGNSFDYAM MHSSFSSLGR GHASLEASGL MSRNTKMSMD ALGSHNLGFG FPLNLNNSSL 60
61 PMRFPSLDPS ELFLQNLRHF ISERHGVLED GWRVEFRQPL NGYQLCAVYC APNGKTFSSI 120
121 QEVACYLGLA INGNYSCMDA EIRNENSLLQ ERLHTPKRRK TSRW
|
| Detection Method: | |
| Confidence: | 10.154902 |
| Match: | 2e7oA |
| Description: | No description for 2e7oA was found. |
|
Region A: Residues: [345-560] |
1 11 21 31 41 51
| | | | | |
1 PNNGFPEQKG SSVSAQLRRF PFNGQTMSPF AVKSGTHFQA GGSLSSGNNG CGCEEAKNGC 60
61 PMQFEDFFVL SLGRIDIRQS YHNVNVIYPI GYKSCWHDKI TGSLFTCEVS DGNSGPIFKV 120
121 TRSPCSKSFI PAGSTVFSCP KIDEMVEQNS DKLSNRRDST QERDDDASVE ILLSEHCPPL 180
181 GDDILSCLRE KSFSKTVNSL RSEVDSSRVD FDKNLS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [561-752] |
1 11 21 31 41 51
| | | | | |
1 YDQDHGVEIG DIVVEEDSLS DAWKKVSQKL VDACSIVLKQ KGTLNFLCKH VDRETSEINW 60
61 DTMNEKDNVI LSLSKFCCSL APCSVTCGEK DKSEFAAVVD ALSRWLDQNR FGLDADFVQE 120
121 MIEHMPGAES CTNYRTLKSR SSSSVPITVA EGALVVKPKG GENVKDEVFG EISRKAKKPK 180
181 LNGGHGVRNL HP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [753-808] |
1 11 21 31 41 51
| | | | | |
1 PPGRPMCLRL PPGLVGDFLQ VSEVFWRFHE ILGFEEAFSP ENLEQELINP VFDGLF
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [809-1021] |
1 11 21 31 41 51
| | | | | |
1 LDKPGKDDKR SEINFTDKDS TATKLFSLFD ESRQPFPAKN TSASELKEKK AGDSSDFKIS 60
61 DSSRGSCVGA LLTRAHISLL QVLICELQSK VAAFVDPNFD SGESRSRRGR KKDDSTLSAK 120
121 RNKLHMLPVN EFTWPELARR YILSLLSMDG NLESAEIAAR ESGKVFRCLQ GDGGLLCGSL 180
181 TGVAGMEADS MLLAEAIKKI SGSLTSENDV LSV
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1022-1098] |
1 11 21 31 41 51
| | | | | |
1 EDDDSDGLDA TETNTCSGDI PEWAQVLEPV KKLPTNVGTR IRKCVYEALE RNPPEWAKKI 60
61 LEHSISKEIY KGNASGP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1099-1316] |
1 11 21 31 41 51
| | | | | |
1 TKKAVLSLLA DIRGGDLVQR SIKGTKKRTY ISVSDVIMKK CRAVLRGVAA ADEDKVLCTL 60
61 LGRKLLNSSD NDDDGLLGSP AMVSRPLDFR TIDLRLAAGA YDGSTEAFLE DVLELWSSIR 120
121 VMYADQPDCV DLVATLSEKF KSLYEAEVVP LVQKLKDYRK LECLSAEMKK EIKDIVVSVN 180
181 KLPKAPWDEG VCKVCGVDKD DDSVLLCDTC DAEYHTYC
|
| Detection Method: | |
| Confidence: | 11.09691 |
| Match: | 2i13A |
| Description: | No description for 2i13A was found. |
|
Region A: Residues: [1317-1478] |
1 11 21 31 41 51
| | | | | |
1 LNPPLIRIPD GNWYCPSCVI AKRMAQEALE SYKLVRRRKG RKYQGELTRA SMELTAHLAD 60
61 VMEEKDYWEF SAEERILLLK LLCDELLSSS LVHQHLEQCA EAIIEMQQKL RSLSSEWKNA 120
121 KMRQEFLTAK LAKVEPSILK EVGEPHNSSY FADQMGCDPQ PQ
|
| Detection Method: | |
| Confidence: | 3.221849 |
| Match: | 1tf6A |
| Description: | Transcription factor IIIA, TFIIIA |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1479-1590] |
1 11 21 31 41 51
| | | | | |
1 EGVGDGVTRD DETSSTAYLN KNQGKSPLET DTQPGESHVN FGESKISSPE TISSPGRHEL 60
61 PIADTSPLVT DNLPEKDTSE TLLKSVGRNH ETHSPNSNAV ELPTAHDASS QA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1591-1635] |
1 11 21 31 41 51
| | | | | |
1 SQELQACQQD LSATSNEIQN LQQSIRSIES QLLKQSIRRD FLGTD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1636-1863] |
1 11 21 31 41 51
| | | | | |
1 ASGRLYWGCC FPDENPRILV DGSISLQKPV QADLIGSKVP SPFLHTVDHG RLRLSPWTYY 60
61 ETETEISELV QWLHDDDLKE RDLRESILWW KRLRYGDVQK EKKQAQNLSA PVFATGLETK 120
121 AAMSMEKRYG PCIKLEMETL KKRGKKTKVA EREKLCRCEC LESILPSMIH CLICHKTFAS 180
181 DDEFEDHTES KCIPYSLATE EGKDISDSSK AKESLKSDYL NVKSSAGK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1864-2004] |
1 11 21 31 41 51
| | | | | |
1 DVAEISNVSE LDSGLIRYQE EESISPYHFE EICSKFVTKD CNRDLVKEIG LISSNGIPTF 60
61 LPSSSTHLND SVLISAKSNK PDGGDSGDQV IFAGPETNVE GLNSESNMSF DRSVTDSHGG 120
121 PLDKPSGLGF GFSEQKNKKS S
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [2005-2176] |
1 11 21 31 41 51
| | | | | |
1 GSGLKSCCVV PQAALKRVTG KALPGFRFLK TNLLDMDVAL PEEALRPSKS HPNRRRAWRV 60
61 FVKSSQSIYE LVQATIVVED MIKTEYLKNE WWYWSSLSAA AKISTLSALS VRIFSLDAAI 120
121 IYDKPITPSN PIDETKPIIS LPDQKSQPVS DSQERSSRVR RSGKKRKEPE GS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
