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View Structure Prediction Details

Protein: SCP54_ARATH
Organism: Arabidopsis thaliana
Length: 190 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SCP54_ARATH.

Description E-value Query
Range
Subject
Range
SCP34_ARATH - Serine carboxypeptidase-like 34 OS=Arabidopsis thaliana GN=SCPL34 PE=2 SV=2
230.0 [0..11] [189..43]

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Predicted Domain #1
Region A:
Residues: [1-190]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATKTFSLPF LLIVCIFSQL SSTFGDPSVK DLGQHAGYFS LPRSKSARLF HFFFQSRNNS  60
   61 SDPVVIWLSG GPGCSSSNQR YISYLKISNL IYVDQPIRTG FSYANDSTDL RHDEDSVSND 120
  121 LYDFLQAFFK EHPNLAKDDF YITGESYAGH YIPALASRVH NGNEKKEGIV INLKVTDISL 180
  181 VTATATWSAG 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 56.045757
Match: 1bcrA
Description: Serine carboxypeptidase II
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
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