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View Structure Prediction Details

Protein: gi|20465795, gi|...
Organism: Arabidopsis thaliana
Length: 252 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|20465795, gi|....

Description E-value Query
Range
Subject
Range
gi|21592434 - gi|21592434|gb|AAM64385.1| unknown [Arabidopsis thaliana]
408.0 [0..11] [252..1]

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Predicted Domain #1
Region A:
Residues: [1-252]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNMIQRFMQS MAKTRGLCHP DCVKASSEQE DYDASQLSIW WIMLGRKTTR EKWMNQALSS  60
   61 LSKTCISIWW KMSGIRGKMC REREQPLTVK DCLECAFKKG LPRREHWAHV GCTFKAPPFA 120
  121 CHIPRVPMKG EVIETKSLDE AFKLLIKQPV GARLHVFSPD LDNVGEGVYE GLSSLSRKES 180
  181 RYVGLRDVII VAVNKSEGKT VATVKICYKK KTSFVKVCLS RMFVQLGGGE ESQVKEPTGL 240
  241 LVDFCIPRLS IN

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 5.33
Match: 1gecE
Description: Glycyl endopeptidase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.465394995609075 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle