YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: PAE3_ARATH
Organism: Arabidopsis thaliana
Length: 416 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PAE3_ARATH.

Description E-value Query
Range
Subject
Range
PAE12_ARATH - Pectin acetylesterase 12 OS=Arabidopsis thaliana GN=PAE12 PE=2 SV=1
557.0 [0..4] [416..1]
gi|87241323 - gi|87241323|gb|ABD33181.1| Pectinacetylesterase [Medicago truncatula]
541.0 [0..8] [415..1]
gi|125559288 - gi|125559288|gb|EAZ04824.1| hypothetical protein OsI_27003 [Oryza sativa Indica Group]
gi|222637526, gi... - gi|51963586|ref|XP_506495.1| PREDICTED P0455H11.118-1 gene product [Oryza sativa (japonica cultivar-...
511.0 [0..13] [416..5]

Back

Predicted Domain #1
Region A:
Residues: [1-160]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSVLRIAAA IFWLWLFIVL GVIGSGNVRD TDDEISLLES QLVVTSPSQL LMVPLTLIQA  60
   61 AASKGAVCLD GTLPGYHLHP GSGSGANRWL IQLEGGGWCN TRRSCIFRKT TRRGSSNHME 120
  121 KVLAFTGILS NKSNENPDFF NWNRVKLRYC DGASFTGDSQ 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 33.107905
Match: PF03283.4
Description: No description for PF03283.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [161-282]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DESSQLYYRG QRIWHSAMEE LLSKGMQKAE QALLSGCSAG GLASILHCDQ FKELFPGTTT  60
   61 VKCLSDAGMF MDAVDVSGGH SLRKMFQGVV TVQNLQKELS TACTKHLDPT SCFFPQNLVS 120
  121 GI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.154902
Match: 2qzpA
Description: No description for 2qzpA was found.

Predicted Domain #3
Region A:
Residues: [283-416]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KTPMFLLNAA YDAWQVQESL APPSVDLSGS WKACKSDHSH CNSSQIQFFQ DFRTHMVDAV  60
   61 KSFATSTHNG VFINSCFAHC QSERQDTWYA PDSPTLHGKT VAESVGDWYF DRTTVKAIDC 120
  121 PYPCDKTCHN LIFK

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 16.251812
Match: PF03283.4
Description: No description for PF03283.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.881 N/A N/A a.1.1 Globin-like


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle