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View Structure Prediction Details

Protein: GDL30_ARATH
Organism: Arabidopsis thaliana
Length: 344 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GDL30_ARATH.

Description E-value Query
Range
Subject
Range
gi|92886160 - gi|92886160|gb|ABE88162.1| Lipolytic enzyme, G-D-S-L [Medicago truncatula]
309.0 [0..1] [343..1]

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Predicted Domain #1
Region A:
Residues: [1-344]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNCLMFFKML LAFSFISLFY VGNAQQSYGN STVSALFAFG DSILDTGNNN LLLSVSKVNF  60
   61 YPYGRDFIGG RATGRFGNGR VFSDIIAEGL GLKNLLPAYR DPYLWNNDLT TGVCFASGGS 120
  121 GLDPITARTT GSIWVSDQVT DFQNYITRLN GVVGNQEQAN AVISNAVYLI SAGNNDIAIT 180
  181 YFTTGARRLQ YTLPAYNDQL VSWTRDLIKS LYDMGARKFA VMGTLPLGCL PGARALTRAC 240
  241 ELFVNQGAAM FNQQLSADID NLGATFPGAK FVYVDMYNPL LGLIINPQAS GFIDVADACC 300
  301 CTPTHLIPCL DASRYVFWDV AHPTQKSYET IAPQIIENIK AKLA

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.44
Match: 1escA
Description: THE MOLECULAR MECHANISM OF ENANTIORECOGNITION BY ESTERASES
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.555413709926701 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
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