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View Structure Prediction Details

Protein: WAXSB_ARATH
Organism: Arabidopsis thaliana
Length: 435 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for WAXSB_ARATH.

Description E-value Query
Range
Subject
Range
WAXS8_ARATH - Probable long-chain-alcohol O-fatty-acyltransferase 8 OS=Arabidopsis thaliana GN=At1g34520 PE=3 SV=1
252.0 [0..1] [352..1]

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Predicted Domain #1
Region A:
Residues: [1-149]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEELKNLIK VSVSVIISIS YCYYVPTRIK PGIFRFLSVL PICALFRVLP LFFASVHLSG  60
   61 YTALFISWLA NFKLILFSFN QGPLFPLPSN LTRFICFACF PIKLQQNPKR RDYFFQWEYP 120
  121 IEVLFSNQFV TKVVILSVVL HMYNHIQHI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [150-325]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YPIVLFVLYP LHLYLVLEIL LKLFNAFFSI ALDCELEPQL NEPYLAYSLR DFWGHWWTLM  60
   61 LPTILLPDVY ARMRRITEGK MNSENALYLG VFVTFLVSGA LHEFLFFYIT RERPTGEVTL 120
  121 FFVLHGVCIV AYDARLKKKI ARWIGFEFCP CLILQVMVMG FVVVTAGWLF FPPLVR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [326-435]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TGKIQRFANE ALLFIGFVRN LFNESLFFMR KFFNEALFFT GFVMRKLFNG ALFFIGFVKL  60
   61 KLFNESSLFF IMRKLFNEAM FFIGFVIRKL FNEAMFFIGF VKLKLFTFGW 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle