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View Structure Prediction Details

Protein: gi|4567211, gi|1...
Organism: Arabidopsis thaliana
Length: 105 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|4567211, gi|1....

Description E-value Query
Range
Subject
Range
gi|30141019 - gi|30141019|dbj|BAC75923.1| cysteine protease-1 [Helianthus annuus]
139.0 [0..2] [102..60]

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Predicted Domain #1
Region A:
Residues: [1-105]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGHYLVPIHQ TESSFDVFKK NAEYIVKTNK ERKPYKLKLN KFANLTDVEF VNAHTCFDMS  60
   61 DHKKILDSKP FFYENMTQAP DSLDWREKGA VTNVKDQGPT CSKKS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 30.522879
Match: 1pciA
Description: Caricain (protease omega)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle