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View Structure Prediction Details

Protein: UBP3_ARATH
Organism: Arabidopsis thaliana
Length: 371 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for UBP3_ARATH.

Description E-value Query
Range
Subject
Range
gi|114649194 - gi|114649194|ref|XP_001135418.1| PREDICTED: hypothetical protein [Pan troglodytes]
286.0 [0..1] [368..319]

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Predicted Domain #1
Region A:
Residues: [1-371]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGAAGSKLEK ALGDQFPEGE RYFGFENFGN TCYCNSVLQA LYFCVPFREQ LLEYYTSNKS  60
   61 VADAEENLMT CLADLFSQIS SQKKKTGVIA PKRFVQRLKK QNELFRSYMH QDAHEFLNYL 120
  121 LNEVVDILEK EAKATKTEHE TSSSSSPEKI ANGLKVPQAN GVVHKEPIVT WVHNIFQGIL 180
  181 TNETRCLRCE TVTARDETFL DLSLDIEQNS SITSCLKNFS STETLHAEDK FFCDKCCSLQ 240
  241 EAQKRMKIKK PPHILVIHLK RFKYIEQLGR YKKLSYRVVF PLELKLSNTV EPYADVEYSL 300
  301 FAVVVHVGSG PNHGHYVSLV KSHNHWLFFD DENVEMIEES AVQTFFGSSQ EYSSNTDHGY 360
  361 ILFYESLGPT K

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 60.39794
Match: 2ibiA
Description: No description for 2ibiA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle