| Protein: | EF114_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 248 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EF114_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
186.0 | [0..34] | [236..1] |
|
Region A: Residues: [1-71] |
1 11 21 31 41 51
| | | | | |
1 MYGKRPFGGD ESEEREEDEN LFPVFSARSQ HDMRVMVSAL TQVIGNQQSK SHDNISSIDD 60
61 NYPSVYNPQD P
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [72-170] |
1 11 21 31 41 51
| | | | | |
1 NQQVAPTHQD QGDLRRRHYR GVRQRPWGKW AAEIRDPKKA ARVWLGTFET AESAALAYDE 60
61 AALKFKGSKA KLNFPERVQL GSNSTYYSSN QIPQMEPQS
|
| Detection Method: | |
| Confidence: | 24.154902 |
| Match: | 2gccA |
| Description: | SOLUTION STRUCTURE OF THE GCC-BOX BINDING DOMAIN, NMR, MINIMIZED MEAN STRUCTURE |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.339357445627225 | bayes_pls_golite062009 |
|
Region A: Residues: [171-248] |
1 11 21 31 41 51
| | | | | |
1 IPNYNQYYHD ASSGDMLSFN LGGGYGSGTG YSMSHDNSTT TAATTSSSSG GSSRQQEEQD 60
61 YARFWRFGDS SSSPHSGY
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.619 | b.1.1 | Immunoglobulin |
| View | Download | 0.464 | b.101.1 | Ribonuclease domain of colicin E3 |
| View | Download | 0.407 | d.56.1 | GroEL-intermediate domain like |
| View | Download | 0.388 | b.101.1 | Ribonuclease domain of colicin E3 |
| View | Download | 0.345 | b.59.1 | XRCC4, N-terminal domain |
