| Protein: | LRKS4_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 684 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LRKS4_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
438.0 | [0..2] | [668..6] |
|
Region A: Residues: [1-170] |
1 11 21 31 41 51
| | | | | |
1 MSQTFAVILL LLIFLTHLVS SLIQDFSFIG FKKASPNLTL NGVAEIAPTG AIRLTTETQR 60
61 VIGHAFYSLP IRFKPIGVNR ALSFSTSFAI AMVPEFVTLG GHGLAFAITP TPDLRGSLPS 120
121 QYLGLLNSSR VNFSSHFFAV EFDTVRDLEF EDINDNHVGI DINSMESSIS
|
| Detection Method: |  |
| Confidence: | 10.522879 |
| Match: | 2bqpA |
| Description: | Legume lectin |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.618040160447065 | bayes_pls_golite062009 |
|
Region A: Residues: [171-319] |
1 11 21 31 41 51
| | | | | |
1 TPAGYFLANS TKKELFLDGG RVIQAWIDYD SNKKRLDVKL SPFSEKPKLS LLSYDVDLSS 60
61 VLGDEMYVGF SASTGLLASS HYILGWNFNM SGEAFSLSLP SLPRIPSSIK KRKKKRQSLI 120
121 LGVSLLCSLL IFAVLVAASL FVVRKVKDE
|
| Detection Method: | |
| Confidence: | 4.54 |
| Match: | 1qmoE |
| Description: | Structure of FRIL, a legume lectin that delays hematopoietic progenitor maturation |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [320-684] |
1 11 21 31 41 51
| | | | | |
1 DRVEEWELDF GPHRFSYREL KKATNGFGDK ELLGSGGFGK VYKGKLPGSD EFVAVKRISH 60
61 ESRQGVREFM SEVSSIGHLR HRNLVQLLGW CRRRDDLLLV YDFMPNGSLD MYLFDENPEV 120
121 ILTWKQRFKI IKGVASGLLY LHEGWEQTVI HRDIKAANVL LDSEMNGRVG DFGLAKLYEH 180
181 GSDPGATRVV GTFGYLAPEL TKSGKLTTST DVYAFGAVLL EVACGRRPIE TSALPEELVM 240
241 VDWVWSRWQS GDIRDVVDRR LNGEFDEEEV VMVIKLGLLC SNNSPEVRPT MRQVVMYLEK 300
301 QFPSPEVVPA PDFLDANDSM CLDERSGSAG EFEDFVDSAR FYSGPNETTT SSIFSFSGKT 360
361 RTDPR
|
| Detection Method: | |
| Confidence: | 70.0 |
| Match: | 2qkwB |
| Description: | No description for 2qkwB was found. |
