YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: AKR2A_ARATH
Organism: Arabidopsis thaliana
Length: 342 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AKR2A_ARATH.

Description E-value Query
Range
Subject
Range
gi|115951930 - gi|115951930|ref|XP_001184056.1| PREDICTED: similar to ankyrin 2,3/unc44 [Strongylocentrotus purpura...
405.0 [0..2] [341..458]

Back

Predicted Domain #1
Region A:
Residues: [1-342]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASNSEKNPL LSDEKPKSTE ENKSSKPESA SGSSTSSAMP GLNFNAFDFS NMASILNDPS  60
   61 IREMAEQIAK DPAFNQLAEQ LQRSIPNAGQ EGGFPNFDPQ QYVNTMQQVM HNPEFKTMAE 120
  121 KLGTALVQDP QMSPFLDAFS NPETAEHFTE RMARMKEDPE LKPILDEIDA GGPSAMMKYW 180
  181 NDPEVLKKLG EAMGMPVAGL PDQTVSAEPE VAEEGEEEES IVHQTASLGD VEGLKAALAS 240
  241 GGNKDEEDSE GRTALHFACG YGELKCAQVL IDAGASVNAV DKNKNTPLHY AAGYGRKECV 300
  301 SLLLENGAAV TLQNLDEKTP IDVAKLNSQL EVVKLLEKDA FL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 81.154902
Match: 1n11A
Description: Ankyrin-R
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle