| Protein: | PRT1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 410 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PRT1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
163.0 | [0..73] | [324..137] |
|
Region A: Residues: [1-156] |
1 11 21 31 41 51
| | | | | |
1 MAETMKDITM KNDESQEEEI PDQFLCCVCL ELLYKPIVLS CGHLSCFWCV HKSMNGFRES 60
61 HCPICRDPYV HFPSVCQKLY FLLKKMYPLA HKKREEQVLK EEQERECFSP QIDLVLDLSV 120
121 CSGDSLNVSD KQKVEECSNA ANLLSSSSSR GDIPCI
|
| Detection Method: |  |
| Confidence: | 6.045757 |
| Match: | 2cklB |
| Description: | No description for 2cklB was found. |
|
Region A: Residues: [157-289] |
1 11 21 31 41 51
| | | | | |
1 PKNQEPTDAK ALNVHENELL KDNKVSKQIS KDDLLCSACK ELLVRPVVLN CGHVYCEGCV 60
61 VDMAEESEKI KCQECNVCDP RGFPKVCLIL EQLLEENFPE EYNSRSSKVQ KTLAHNSKGN 120
121 IQSYLKEGPS LSN
|
| Detection Method: | |
| Confidence: | 8.69897 |
| Match: | 1rmdA |
| Description: | RAG1 DIMERIZATION DOMAIN |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.0938889867773109 | bayes_pls_golite062009 |
|
Region A: Residues: [290-410] |
1 11 21 31 41 51
| | | | | |
1 DNNNDDPWLA NPGSNVHFGA GCDSCGVYPI IGDRYRCKDC KEEIGYDLCK DCYETPSKVP 60
61 GRFNQQHTPD HRLELARSPQ VLINFNSIGI LLGPVISNEG MDTDEGEEGP PGSSNESSST 120
121 E
|
| Detection Method: | |
| Confidence: | 3.12 |
| Match: | 2dipA |
| Description: | No description for 2dipA was found. |
| Term | Confidence | Notes |
| binding | 0.0159092335062434 | bayes_pls_golite062009 |
