| Protein: | gi|225897930, gi... |
| Organism: | Arabidopsis thaliana |
| Length: | 274 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|225897930, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
247.0 | [0..1] | [274..1] |
|
|
206.0 | [0..2] | [267..518] |
|
|
201.0 | [0..2] | [267..164] |
|
|
201.0 | [0..2] | [267..90] |
|
|
201.0 | [0..2] | [267..78] |
|
|
200.0 | [0..2] | [267..202] |
|
Region A: Residues: [1-165] |
1 11 21 31 41 51
| | | | | |
1 MGKGRAPCCD KTKVKRGPWS HDEDLKLISF IHKNGHENWR SLPKQAGLLR CGKSCRLRWI 60
61 NYLRPDVKRG NFSAEEEDTI IKLHQSFGNK WSKIASKLPG RTDNEIKNVW HTHLKKRLSS 120
121 ETNLNADEAG SKGSLNEEEN SQESSPNASM SFAGSNISSK DDDAQ
|
| Detection Method: |  |
| Confidence: | 31.69897 |
| Match: | 1h88C |
| Description: | c-Myb, DNA-binding domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [166-274] |
1 11 21 31 41 51
| | | | | |
1 ISQMFEHILT YSEFTGMLQE VDKPELLEMP FDLDPDIWSF IDGSDSFQQP ENRALQESEE 60
61 DEVDKWFKHL ESELGLEEND NQQQQQQHKQ GTEDEHSSSL LESYELLIH
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.350 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.333 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.333 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.313 | c.52.1 | Restriction endonuclease-like |
| View | Download | 0.305 | a.118.26 | Description not found. |
| View | Download | 0.304 | a.2.3 | Chaperone J-domain |
| View | Download | 0.304 | a.2.3 | Chaperone J-domain |
| View | Download | 0.302 | a.24.3 | Cytochromes |
| View | Download | 0.280 | a.74.1 | Cyclin-like |
| View | Download | 0.274 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
