YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: FAP1_ARATH
Organism: Arabidopsis thaliana
Length: 279 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FAP1_ARATH.

Description E-value Query
Range
Subject
Range
gi|228617 - gi|228617|prf||1807331A chalcone flavanone isomerase
256.0 [0..54] [279..46]

Back

Predicted Domain #1
Region A:
Residues: [1-279]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSFRFPFSF SQPPRATTSF SGFSISAVAV SVTVGAAAAG AAIAASRNPS HPILEWAFSS  60
   61 HRSSLSPWGS ITLADESVVE PKTGFSFPAS IGDSRRLLGV GLRKKSLLGL KNIDVYAFGV 120
  121 YADCDDVKKL VGDKYANLPA SEIRGNKSFM DDLMEADIKM TIRLQIVYGK LNIRSVRNAF 180
  181 QESVGNRLKK FGGSDNDELL QSFTSLFKDE YKIPRNSTID LTKDPGHVLS VAIEGNHVGS 240
  241 VKSHLLCRSI LDLYIGEEPF DKNAREDFLD NAASLAFDN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 61.39794
Match: 1eypA
Description: Chalcone isomerase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle