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View Structure Prediction Details

Protein: ZWIP6_ARATH
Organism: Arabidopsis thaliana
Length: 302 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ZWIP6_ARATH.

Description E-value Query
Range
Subject
Range
gi|73947291 - gi|73947291|ref|XP_541354.2| PREDICTED: similar to Zinc finger protein 606 (Zinc finger protein 328)...
469.0 [0..2] [300..2532]

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Predicted Domain #1
Region A:
Residues: [1-180]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYNNNQYSFS GDEDSVVLSL GPPGQQYPSH NKPTSTKPSS DHEFNHPLTN PNGVTVALHI  60
   61 GPPSSDKETL SGGNNQEGLT ARQGQYWIPS LSQILVGPTQ FSCSVCNKTF NRFNNMQMHM 120
  121 WGHGSQYRKG PESLRGTKSS SSILRLPCYC CAEGCKNNID HPRSKPLKDF RTLQTHYKRK 180
  181 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 56.0
Match: 2i13A
Description: No description for 2i13A was found.

Predicted Domain #2
Region A:
Residues: [181-302]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HGAKPFRCRK KCEKTFAVRG DWRTHEKNCG KLWFCVCGSD FKHKRSLKDH VRAFGDGHAA  60
   61 HTVSDRVVGI GDADEDDEEE EEEEEDDVEE EDAHEENVRG EKNYGIRYDH FRRYGQISDD 120
  121 NY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 17.30103
Match: 2gliA
Description: Five-finger GLI1
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.414217765611205 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
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