| Protein: | ATL11_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 404 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATL11_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
309.0 | [0..1] | [404..1] |
|
|
162.0 | [0..50] | [358..36] |
|
|
161.0 | [0..18] | [381..2] |
|
Region A: Residues: [1-131] |
1 11 21 31 41 51
| | | | | |
1 MNPKGRTNLN RSIIGGHDHG SILQLLLFLL LLSSHGGFKF VAGQATHGGS DVSGDSSRFD 60
61 PTMAILMIVL VSVFFFLGFF SVYIRRCLER VMGMDYGNPN DAGNWLATNR QQARGLDASI 120
121 IETFPTFQYS T
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [132-193] |
1 11 21 31 41 51
| | | | | |
1 VKTLRIGKEA LECSVCLNEF EDDETLRLIP KCCHVFHPGC IDAWLRSHTT CPLCRADLIP 60
61 VP
|
| Detection Method: | |
| Confidence: | 15.221849 |
| Match: | 1iymA |
| Description: | EL5 RING-H2 domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [194-271] |
1 11 21 31 41 51
| | | | | |
1 GESIVSIQIP GLVNDPPGSD PNGDRIRSLG SPDARLIESV ALTCNQSMPR RSMSTGWNLA 60
61 GMFTNSDRTG QHSENLDR
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.457 | a.28.1 | ACP-like |
| View | Download | 0.455 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.455 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.441 | a.118.1 | ARM repeat |
| View | Download | 0.435 | a.13.1 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
| View | Download | 0.416 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.381 | a.60.5 | Barrier-to-autointegration factor, BAF |
| View | Download | 0.381 | a.60.5 | Barrier-to-autointegration factor, BAF |
| View | Download | 0.317 | c.55.7 | Methylated DNA-protein cysteine methyltransferase domain |
| View | Download | 0.313 | a.60.5 | Barrier-to-autointegration factor, BAF |
| View | Download | 0.235 | a.163.1 | Crustacean CHH/MIH/GIH neurohormone |
| View | Download | 0.215 | a.159.5 | Description not found. |
| View | Download | 0.204 | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
|
Region A: Residues: [272-404] |
1 11 21 31 41 51
| | | | | |
1 FTLRLPQDIH NKLVNPNLSK VHVALPQVMS STRGYRTGSL GSERNYFYYE RFDQDGRLDR 60
61 RPFSITPPYR TSSINHMSPG GSGGDKVRAS SPKSLLLAMR SPFDRLFLGK NNNVGENSSD 120
121 HLRSCDATPS NTV
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
