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View Structure Prediction Details

Protein: ATL2_ARATH
Organism: Arabidopsis thaliana
Length: 304 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATL2_ARATH.

Description E-value Query
Range
Subject
Range
gi|25456278, gi|... - gi|3873408|gb|AAC77829.1| putative zinc finger protein [Arabidopsis thaliana], pir||T52079 probable ...
216.0 [0..1] [304..1]

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Predicted Domain #1
Region A:
Residues: [1-93]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSNDQDPIP FRPEDNNFSG SKTYAMSGKI MLSAIVILFF VVILMVFLHL YARWYLLRAR  60
   61 RRHLRRRSRN RRATMVFFTA DPSTAATSVV ASR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [94-229]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GLDPNVIKSL PVFTFSDETH KDPIECAVCL SEFEESETGR VLPNCQHTFH VDCIDMWFHS  60
   61 HSTCPLCRSL VESLAGIEST AAAREREVVI AVDSDPVLVI EPSSSSGLTD EPHGSGSSQM 120
  121 LREDSGRKPA AIEVPR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 12.39794
Match: 2cklB
Description: No description for 2cklB was found.

Predicted Domain #3
Region A:
Residues: [230-304]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RTFSEFEDEL TRRDSPASQS FRSPMSRMLS FTRMLSRDRR SASSPIAGAP PLSPTLSCRI  60
   61 QMTESDIERG GEESR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle