| Protein: | SLAH3_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 635 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SLAH3_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
417.0 | [0..15] | [617..12] |
|
Region A: Residues: [1-227] |
1 11 21 31 41 51
| | | | | |
1 MEEKPNYVIQ VEEELPTLLR KATTEEMVGF DNYKENGHPF PHSISRFHPS HASTTTLNGQ 60
61 ETSRSIDTME AHHHNYNETT PWTHQRKPSI SMPTSPNVLM ISDPTTSLSS ENHKNSGSTG 120
121 KSVKFLSQPM TKVSSLYIES GNGDDDRRQS HDNHHHHLHR QHQSGHHQNQ NQAANKLKDN 180
181 RYNSFKTWSG KLERQFTRKP ASVEPEAPNR NNQNLNTNEA MPVDRYY
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [228-635] |
1 11 21 31 41 51
| | | | | |
1 DALEGPELET LRPQEEIVLP NDKKWPFLLR YPISTFGMCL GVSSQAIMWK TLATAEPTKF 60
61 LHVPLWINQG LWFISVALIL TIATIYLLKI ILFFEAVRRE YYHPIRINFF FAPFISLLFL 120
121 ALGVPPSIIT DLPHFLWYLL MFPFICLELK IYGQWMSGGQ RRLSRVANPT NHLSVVGNFV 180
181 GALLGASMGL REGPIFFYAV GMAHYLVLFV TLYQRLPTNE TLPKDLHPVF FLFVAAPSVA 240
241 SMAWAKVTGS FDYGSKVCYF IAIFLYFSLA VRINFFRGIK FSLSWWAYTF PMTGAAIATI 300
301 RYATVVKSTM TQIMCVVLCA IATLVVFALL VTTIIHAFVL RDLFPNDLAI AISNRPRPKQ 360
361 NSQHRWLDQL RNVSSENIEN YLKFTDSDSS QSNDVEACNG KTQESDSS
|
| Detection Method: | |
| Confidence: | 53.045757 |
| Match: | 1occA |
| Description: | Mitochondrial cytochrome c oxidase, subunit I |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 1.42961023549618 | bayes_pls_golite062009 |
| oxidoreductase activity | 0.85687705628722 | bayes_pls_golite062009 |
| heme-copper terminal oxidase activity | 0.47386391286947 | bayes_pls_golite062009 |
| transporter activity | 0.03140527942602 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.0221609762878301 | bayes_pls_golite062009 |
