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View Structure Prediction Details

Protein: FACR4_ARATH
Organism: Arabidopsis thaliana
Length: 493 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for FACR4_ARATH.

Predicted Domain #1
Region A:
Residues: [1-413]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSNCIQFLH DKTILVTGVP GFLAKVFVEK ILRIQPKVKK LFLLLRAADN ESAMQRFHSE  60
   61 VLEKDLFRVL KNALGDENLK AFITEKVVPI PGDISVDNLG VKGSDLLQHM WNEIDIIVNV 120
  121 AATTNFDERY DVGLSVNTFG PLNVLNFAKK CVKGQLLLHV STAYVRGEKS GLLHEKTFHM 180
  181 GETLNGHRKL VIETEMELMK QKLKELQKQN CSEEEISQSM KDLGMSRAKL HGWPNTYVFT 240
  241 KSMGEMLLGN YRENLPIVII RPTMITSTFS EPFPGWIEGL RTIDSVIVAY GKGRLKCFLA 300
  301 DPNSVLDLIP VDMVANAMVT AAAIHAGKLG SQTVYHVGSS CKNPITFEQI HDLAASYFTK 360
  361 NPLVRRDGSS ILVSKGTILS TMAQFSFYMT LRYKLPLQML RLIYVIYPWW NGN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 71.69897
Match: 1lrkA
Description: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [414-493]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KYKDIDRKIK LAMRLVDLYR PYVLFKGIFD DTNTEKLRLK RKEINKEMYG LFEFDPKSID  60
   61 WEDYMTTIHI PGLITYVLKK 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 11.853872
Match: PF03015.11
Description: No description for PF03015.11 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle