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View Structure Prediction Details

Protein: gi|15228972, gi|...
Organism: Arabidopsis thaliana
Length: 183 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15228972, gi|....

Description E-value Query
Range
Subject
Range
gi|2098711 - gi|2098711|gb|AAB57670.1| pectinesterase [Citrus sinensis]
135.0 [0..27] [181..64]

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Predicted Domain #1
Region A:
Residues: [1-183]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRSSTVTSL PCLSLFLLLL LPSVVQSSDD LIDKICQATP FCDLCEASLR PFSPSPSDPK  60
   61 SLGAAMASVV LGNMTDTLGY IQSLIKHAHD PAAERALAQC AELYRPVVKF NIPQAMEAMQ 120
  121 GGKFGFAIYV LGDAEKQTDS CQKGITNAGA DDESSVAVTA RNKLVKNLCD VAISVLKSLM 180
  181 NGL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 26.522879
Match: 1xg2B
Description: Crystal structure of the complex between pectin methylesterase and its inhibitor protein
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle