| Protein: | NAC86_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 476 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NAC86_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
408.0 | [0..1] | [476..1] |
|
|
337.0 | [0..6] | [466..10] |
|
|
322.0 | [0..1] | [427..1] |
|
Region A: Residues: [1-167] |
1 11 21 31 41 51
| | | | | |
1 MAPVSLPPGF RFHPTDEELI TYYLKRKING QEIELEIIPE VDLYKCEPWD LPGKSLIPSK 60
61 DQEWFFFSPR DRKYPNGSRT NRATKGGYWK ATGKDRRVSW RDRAIGTKKT LVYYRGRAPH 120
121 GIRTGWVMHE YRLDESECEP SAFGMQDAYA LCRVFKKIVI EAKPRDQ
|
| Detection Method: |  |
| Confidence: | 65.0 |
| Match: | 1ut4A |
| Description: | Structure of the conserved domain of ANAC, a member of the NAC family of transcription factors |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [168-275] |
1 11 21 31 41 51
| | | | | |
1 HQQQHQPYVH TSSNISGSSS FDVCSDLEIS SNTPYNTAAH IQPRFGNANA ISDHDDWSQY 60
61 LSQNMPTSFS DYGSPYGPYL TQSKVNTEVQ CEMFQHQMSL PPLRVENS
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.453 | a.29.8 | Description not found. |
| View | Download | 0.312 | a.29.16 | Description not found. |
| View | Download | 0.274 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.235 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.235 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.233 | d.26.1 | FKBP-like |
| View | Download | 0.233 | d.26.1 | FKBP-like |
| View | Download | 0.214 | d.26.1 | FKBP-like |
|
Region A: Residues: [276-360] |
1 11 21 31 41 51
| | | | | |
1 QAQTSDFSKR LHQNSGQSGF DDFTFAASNS NQFYNSNVDD HLIHIGNLDE QSYIEEQELI 60
61 LPSFQSNDQD LELYGGSRTN TIDNI
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.675 | c.58.1 | Aminoacid dehydrogenase-like, N-terminal domain |
| View | Download | 0.675 | c.58.1 | Aminoacid dehydrogenase-like, N-terminal domain |
| View | Download | 0.540 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.467 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.439 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.428 | b.81.1 | Trimeric LpxA-like enzymes |
| View | Download | 0.419 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.387 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.382 | d.58.7 | RNA-binding domain, RBD |
|
Region A: Residues: [361-476] |
1 11 21 31 41 51
| | | | | |
1 EIDDFFSFEN QAQDNDNSNV TPNSAGFEMI GEEIIVNHKM LISTRQTTEI LYYQVVPSQI 60
61 LKIHINPVHG NEERTMLMEE DSDDSWFQKA ENVAKMKLKQ ISLVAKRYYK CLTIIF
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.813 | d.201.1 | SRP19 |
| View | Download | 0.811 | d.74.3 | RBP11-like subunits of RNA polymerase |
| View | Download | 0.795 | d.201.1 | SRP19 |
| View | Download | 0.773 | d.74.3 | RBP11-like subunits of RNA polymerase |
| View | Download | 0.713 | d.74.3 | RBP11-like subunits of RNA polymerase |
| View | Download | 0.678 | d.64.2 | Description not found. |
| View | Download | 0.650 | d.201.1 | SRP19 |
| View | Download | 0.612 | d.201.1 | SRP19 |
| View | Download | 0.576 | d.74.3 | RBP11-like subunits of RNA polymerase |
