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View Structure Prediction Details

Protein: gi|20197297, gi|...
Organism: Arabidopsis thaliana
Length: 304 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|20197297, gi|....

Description E-value Query
Range
Subject
Range
gi|41205692 - gi|41205692|gb|AAR99612.1| dTDP-glucose 4,6-dehydratase [Geobacillus stearothermophilus]
225.0 [0..8] [302..3]

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Predicted Domain #1
Region A:
Residues: [1-304]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNQEKTISCC CVLDASTYVG FWILKRLLTR GYSVHAAIRK NGESVLEEKI RDMEANEERL  60
   61 EVYDVDVLDY QSILISLNNC NAVFCCLDNP EGYDEEKEVD LEVRGAINVV EACARTESIE 120
  121 KIVFSSSLTA AIWRDNIGTQ KDVDEKCWSD LDFCLKKKLW HALAKTQSEK AAWALAMDRM 180
  181 VNMVSVNPGL IVGPSVAQHN PRPTMSYLKG AAQMYENGVL AYVDVEFVAD VHIRAFEDTS 240
  241 ACGRYFCFNQ IVNTEEEALK LVQTLSPLIP MPPRHEKEMQ GSEVYEERLR NKKLNKLVEA 300
  301 GFAC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 48.09691
Match: 2c29D
Description: No description for 2c29D was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle