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View Structure Prediction Details

Protein: CRK43_ARATH
Organism: Arabidopsis thaliana
Length: 625 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CRK43_ARATH.

Description E-value Query
Range
Subject
Range
CRK10_ARATH - Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=3
442.0 [0..24] [624..32]

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Predicted Domain #1
Region A:
Residues: [1-170]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASTLISSLA VVLPLTLLAP SMSMKISRID VLGYICNNGT VSNEEAYRRS YQINLDAIRG  60
   61 DMRHVKFGTH EHGDPPERMY VLSQCVSDLS SDECSLCWSR ATDLLSQCFP ATGGWFHLDG 120
  121 CFVRADNYSF YQEPVSHQDT KICASDKEKS AEFKGLVKEV TKSIVEAAPY 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 7.522879
Match: 1fatA
Description: Phytohemagglutinin-L, PHA-L, also arcelin
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 1.49960529341364 bayes_pls_golite062009
protein kinase activity 1.07028239338078 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 0.98109258475825 bayes_pls_golite062009
kinase activity 0.940507392052419 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 0.866225866991391 bayes_pls_golite062009
transferase activity 0.634621009477606 bayes_pls_golite062009
protein binding 0.501917973797597 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [171-290]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SRGFSVAKMG IRDLTVYGLG VCWRTLNDEL CKLCLADGAL SVTSCLPSKE GFALNAGCYL  60
   61 RYSNYTFYNE RGLLAMSFTK ENLTYIFVIS MVGVLAIAAG FWCGKCFYMR TSPKKKIKGT 120
  121 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 12.207608
Match: PF01657.8
Description: No description for PF01657.8 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [291-625]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KTKKFHLFGH LRIEKESESI CTESHLMSFE YSTLKKATNN FNESCKLGVG GYGEVFKGTL  60
   61 SDGREIAIKR LHVSGKKPRD EIHNEIDVIS RCQHKNLVRL LGCCFTNMNS FIVYEFLANT 120
  121 SLDHILFNPE KKKELDWKKR RTIILGTAEG LEYLHETCKI IHRDIKASNI LLDLKYKPKI 180
  181 SDFGLAKFYP EGGKDIPASS LSPSSIAGTL GYMAPEYISK GRLSNKIDAY SFGVLVLEIT 240
  241 SGFRNNKFRS DNSLETLVTQ VWKCFASNKM EEMIDKDMGE DTDKQEMKRV MQIGLLCTQE 300
  301 SPQLRPTMSK VIQMVSSTDI VLPTPTKPPF LHDSM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 72.09691
Match: 2qkwB
Description: No description for 2qkwB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle