| Protein: | ATL46_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 376 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATL46_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
178.0 | [0..31] | [367..45] |
|
Region A: Residues: [1-134] |
1 11 21 31 41 51
| | | | | |
1 MSWVRFTIEQ KDGNFAYPPP FYKDPILSPP SPPPPSSGNR ISPAVLFVIV ILAVLFFISG 60
61 LLHLLVRFLI KHPSATASSR SNRFPEISTS DALQRQLQQL FHLNDSGLDQ AFIDALPVFH 120
121 YKEIVGSAGG GGGN
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [135-192] |
1 11 21 31 41 51
| | | | | |
1 GAAQEPFDCA VCLCEFSEKD KLRLLPMCSH AFHLNCIDTW LQSNSTCPLC RGTLFSPG
|
| Detection Method: | |
| Confidence: | 16.39794 |
| Match: | 1iymA |
| Description: | EL5 RING-H2 domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.0938889867773109 | bayes_pls_golite062009 |
|
Region A: Residues: [193-376] |
1 11 21 31 41 51
| | | | | |
1 FSMENPMFDF DDIREDEEGV TENGSQKTME IQEIVVEKGV LPVRLGKFKR LDNVGNGQGQ 60
61 DVVAGGETSS SNLDARRCFS MGSYQYILGN SELKVPFAND RLPRLKPQDK ESEQTGNSSS 120
121 EDNKKINTVA KGESFSVSKI WLWPKKDKFS SDAQRRLPSS SLNVDDLPKL PWMEEHKKLE 180
181 NDGR
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
