| Protein: | gi|11994182, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 491 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|11994182, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
269.0 | [0..5] | [249..83] |
|
|
266.0 | [0..7] | [258..93] |
|
|
252.0 | [0..23] | [400..521] |
|
Region A: Residues: [1-84] |
1 11 21 31 41 51
| | | | | |
1 MNQVFKGWSR GMSTSRGRSM RSKVESRMRK ESGKTLREIR RAKKLKKKLM TDEERLIYNL 60
61 KRAKKKVALL LQKLKKYDLP ELPS
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.523 | a.4.1 | Homeodomain-like |
| View | Download | 0.403 | a.5.2 | UBA-like |
| View | Download | 0.381 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.381 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.372 | a.29.8 | Description not found. |
| View | Download | 0.370 | a.5.2 | UBA-like |
| View | Download | 0.336 | a.60.6 | DNA polymerase beta, N-terminal domain-like |
| View | Download | 0.312 | a.126.1 | Serum albumin-like |
| View | Download | 0.312 | a.74.1 | Cyclin-like |
| View | Download | 0.302 | a.74.1 | Cyclin-like |
|
Region A: Residues: [85-215] |
1 11 21 31 41 51
| | | | | |
1 PVHDPELFTS EQVQAFKKIG FKNKNYVPVG VRGVFGGVVQ NMHMHWKFHE TVQVCCDNFP 60
61 KEKIKEMASM IARLSGGVVI NIHNVKTIIM FRGRNYRQPK NLIPVNTLTK RKALFKARFE 120
121 QALESQKLNI K
|
| Detection Method: | |
| Confidence: | 4.0 |
| Match: | 1rq8A |
| Description: | Solution structure of the hypothetical protein SAV1595 from Staphylococcus aureus, a putative RNA binding protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [216-330] |
1 11 21 31 41 51
| | | | | |
1 KTEQQLRRMG VNPEDPVAMA SIHRVASTFF NAIDKKEGTP YVFHGDKQSE RGTSVDNREE 60
61 SEPGDEDSDQ EELDRFIAEI EEAADKEWEE EEAAEQEESG RIRYWNREEF AGRSR
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [331-491] |
1 11 21 31 41 51
| | | | | |
1 TPELRSYGDA SHGFRRNDRD THSQRRPNDS DDDDDDGELD SEDDEIPKRF DRARSSNTNT 60
61 RRPREDFKRR SPDPRPRPRA QVRSDDDVLS DLDNTMWDSE DEEDAPPANY ISSSDDDEDE 120
121 NRTVSASSSK QSRFRNNSSR DGINNSKSKS GKQRDEDWDS D
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
