| Protein: | ERF54_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 292 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ERF54_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
182.0 | [0..92] | [289..2] |
|
Region A: Residues: [1-135] |
1 11 21 31 41 51
| | | | | |
1 MDFDEELNLC ITKGKNVDHS FGGEASSTSP RSMKKMKSPS RPKPYFQSSS SPYSLEAFPF 60
61 SLDPTLQNQQ QQLGSYVPVL EQRQDPTMQG QKQMISFSPQ QQQQQQQYMA QYWSDTLNLS 120
121 PRGRMMMMMS QEAVQ
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [136-203] |
1 11 21 31 41 51
| | | | | |
1 PYIATKLYRG VRQRQWGKWV AEIRKPRSRA RLWLGTFDTA EEAAMAYDRQ AFKLRGHSAT 60
61 LNFPEHFV
|
| Detection Method: | |
| Confidence: | 24.30103 |
| Match: | 1gccA |
| Description: | GCC-box binding domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.339357445627225 | bayes_pls_golite062009 |
|
Region A: Residues: [204-292] |
1 11 21 31 41 51
| | | | | |
1 NKESELHDSN SSDQKEPETP QPSEVNLESK ELPVIDVGRE EGMAEAWYNA ITSGWGPESP 60
61 LWDDLDSSHQ FSSESSSSSP LSCPMRPFF
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
