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View Structure Prediction Details

Protein: gi|119360069, gi...
Organism: Arabidopsis thaliana
Length: 212 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|119360069, gi....

Description E-value Query
Range
Subject
Range
gi|110736484 - gi|110736484|dbj|BAF00210.1| hypothetical protein [Arabidopsis thaliana]
294.0 [0..9] [212..73]

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Predicted Domain #1
Region A:
Residues: [1-212]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIFVDRIDAL GRILTRILRH MATELRLNMR GDGFVKVEDL LNLNLKTCAN IQLNSHTIDE  60
   61 IREAVTRDNK KRFSLIDEDG ELLIRANQGH SITTVESEKL LKPILSPEEA PVCVHGTYRK 120
  121 NLESILASGL KRMNRMHVHF SCGLPTDGEV ISGVRRNVNV IIFLHIKKAL EDGIAFYISD 180
  181 NKVILTQGIV GVLPVDYFQK IESWPDRQSI PF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 47.30103
Match: 1wfxA
Description: Crystal Structure of APE0204 from Aeropyrum pernix
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
transferase activity, transferring pentosyl groups 3.32684164956045 bayes_pls_golite062009
transferase activity, transferring glycosyl groups 3.05863250787371 bayes_pls_golite062009
NAD+ ADP-ribosyltransferase activity 2.37948308090148 bayes_pls_golite062009
binding 1.5526011325617 bayes_pls_golite062009
transferase activity 1.5222353301058 bayes_pls_golite062009
DNA binding 1.26521338734397 bayes_pls_golite062009
nucleic acid binding 1.22968208666588 bayes_pls_golite062009
catalytic activity 0.886617552734979 bayes_pls_golite062009
protein binding 0.847020402509418 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle