YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: MTR4_ARATH
Organism: Arabidopsis thaliana
Length: 988 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

No multiple sequence alignment data found for MTR4_ARATH.

Predicted Domain #1
Region A:
Residues: [1-697]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSVKRKSVE ESSDSAPPQK VQREDDSTQI INEELVGCVH DVSFPENYVP LAPSVHNKPP  60
   61 AKDFPFTLDS FQSEAIKCLD NGESVMVSAH TSAGKTVVAS YAIAMSLKEN QRVIYTSPIK 120
  121 ALSNQKYRDF KEEFSDVGLM TGDVTIDPNA SCLVMTTEIL RSMQYKGSEI MREVAWIIFD 180
  181 EVHYMRDSER GVVWEESIVM APKNSRFVFL SATVPNAKEF ADWVAKVHQQ PCHIVYTDYR 240
  241 PTPLQHYVFP AGGNGLYLVV DEKSKFHEDS FQKSLNALVP TNESDKKRDN GKFQKGLVIG 300
  301 KLGEESDIFK LVKMIIQRQY DPVILFSFSK KECEALAMQM SKMVLNSDDE KDAVETIFAS 360
  361 AIDMLSDDDK KLPQVSNILP ILKRGIGVHH SGLLPILKEV IEILFQEGLI KCLFATETFS 420
  421 IGLNMPAKTV VFTNVRKFDG DKFRWLSSGE YIQMSGRAGR RGIDKRGICI LMVDEKMEPA 480
  481 VAKSMLKGSA DSLNSAFHLS YNMLLNQLRC EEGDPENLLR NSFFQFQADR AIPDLEKQIK 540
  541 SLEEERDSLV IEEEESLKNY YNLILQYKSL KKDIREIVFT PKYCLPFLLP NRAVCLDCTN 600
  601 DDEEPQSFSI EDQDTWGVIM KFNKVKSLSE DDDSRRPEDA NYTVDVLTRC MVSKDGVGKK 660
  661 KVKAVPIKER GEPVVVTVPL SQIKSLSSAI MNIPKDL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 40.39794
Match: 2va8A
Description: No description for 2va8A was found.

Predicted Domain #2
Region A:
Residues: [698-931]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VPLEARENAL KKVSELLSRH PDGIPLDPEV DMKIKSSSYK KTVRRLEALE NLFEKHKIAK  60
   61 SPLITEKLKV LQMKEELIAK IKSLKKTVRS STALAFKDEL KARKRVLRRL GYITSDNVVE 120
  121 LKGKVACEIS SAEELTLTEL MFSGIFKDAK VEELVSLLSC FVWRERLPDA AKPREELDLL 180
  181 FIQLQDTARR VAEVQLDCKV EIDVESFVQS FRPDIMEAVY AWAKGSKFYE VMEI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 35.522879
Match: 2q0zX
Description: No description for 2q0zX was found.

Predicted Domain #3
Region A:
Residues: [932-988]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ARVFEGSLIR AIRRMEEVLQ QLIVAAKSIG ETQLEAKLEE AVSKIKRDIV FAASLYL

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 5.79588
Match: PF08148.4
Description: No description for PF08148.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle