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View Structure Prediction Details

Protein: gi|109134211, gi...
Organism: Arabidopsis thaliana
Length: 58 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|109134211, gi....

Description E-value Query
Range
Subject
Range
gi|32307622 - gi|32307622|gb|AAP79216.1| ribosomal protein rpL33 [Bigelowiella natans]
79.0 [0..4] [58..72]

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Predicted Domain #1
Region A:
Residues: [1-58]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGDKRKKTFM FIRLVSAAGT GFFYVKRKST KGLLEKLEFR KYDPRVNRHV LFTEQKMK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 14.39794
Match: 1nkw1
Description: 50S subunit
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle