YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: PTR11_ARATH
Organism: Arabidopsis thaliana
Length: 565 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PTR11_ARATH.

Description E-value Query
Range
Subject
Range
PTR1_ARATH - Protein NRT1/ PTR FAMILY 8.1 OS=Arabidopsis thaliana GN=NPF8.1 PE=1 SV=1
335.0 [0..8] [561..2]

Back

Predicted Domain #1
Region A:
Residues: [1-428]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIPEEEVAL LEDYVSDSVD HRGFPAGKSS TGGWRSAWFI IGVEVAERFA YFGIACNLIT  60
   61 YLTGPLGQST AKAAVNVNTW SGTASILPIL GAFVADAYLG RYRTIVVASL IYILGLGLLT 120
  121 LSASLIIMGL SKQRNDASAK PSIWVNTLFF CSLYLVAIGQ GGHKPCVQAF GADQFDAEDP 180
  181 KEVIARGSFF NWWFLSLSAG ISISIIVVAY VQENVNWAFG FGIPCLFMVM ALAIFLLGRK 240
  241 IYRYPKGHHE EVNSSNTFAR IGRVFVIAFK NRKLRLEHSS LELDQGLLED GQSEKRKDRL 300
  301 NFLAKAMISR EGVEPCSGRD VDDAKALVRL IPIWITYVVS TIPYAQYITF FTKQGVTVDR 360
  361 RILPGVEIPA ASLLSFVGVS ILISVPLYER VFLPIARKIT KKPFGITMLQ RIGAGMVLSV 420
  421 FNMMLAAL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 5.0
Match: 2gfpA
Description: No description for 2gfpA was found.

Predicted Domain #2
Region A:
Residues: [429-565]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VESKRLKIAR EHGLVDKPDV TVPMSIWWFV PQYLLLGMID LFSMVGTQEF FYDQVPTELR  60
   61 SIGLSLSLSA MGLSSFLSGF LISLIDWATG KDGWFNSNLN RAHVDYFYWL LAAFTAIAFF 120
  121 AFLFISKMYV YRRLDQV

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.43
Match: 2v8nA
Description: No description for 2v8nA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle