| Protein: | PCS2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 452 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PCS2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
786.0 | [0..1] | [451..1] |
|
|
778.0 | [0..1] | [452..1] |
|
|
777.0 | [0..1] | [452..1] |
|
|
777.0 | [0..1] | [452..1] |
|
|
771.0 | [0..1] | [452..1] |
|
|
771.0 | [0..1] | [451..1] |
|
Region A: Residues: [1-229] |
1 11 21 31 41 51
| | | | | |
1 MSMASLYRRS LSPPAIDFAS FEGKQIFNEA LQKGTMEGFF GLISYFQTQS EPAFCGLASL 60
61 SMVLNSLSID PGRKWKGPWR WFDESMLECC EPLEIVKDKG ISFGKVVCLA HSSGAKVEAF 120
121 RTNQSTIDDF RKYVVKCSTS DNCHMISTYH RQVLKQTGTG HFSPIGGYNA ERDMALILDV 180
181 ARFKYPPHWV PLKLLWDAMD SIDQSTGRRR GFMLISRPHR EPGLLYTLS
|
| Detection Method: |  |
| Confidence: | 81.221849 |
| Match: | 2btwA |
| Description: | Crystal structure of Alr0975 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [230-379] |
1 11 21 31 41 51
| | | | | |
1 CKDESWISIA KYLKEDVPRL VSSQHVDTIE RILYVVFKSL PANFNQFIKW MAEIRRTEDV 60
61 NQNLSSEEKS RLKLKQELLK QVQETKLFKH VDKFLSSVYE DNLPYVAAKV YCDGDEILSG 120
121 YESDESCCKE TCVKCIKGLG EEKVTVVAYP
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.737 | N/A | N/A | a.118.13 | Arp2/3 complex 16 kDa subunit ARPC5 |
| View | Download | 0.737 | N/A | N/A | a.118.13 | Arp2/3 complex 16 kDa subunit ARPC5 |
| View | Download | 0.526 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.499 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.499 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.496 | N/A | N/A | a.71.1 | Endoplasmic reticulum protein ERP29, C-domain |
| View | Download | 0.496 | N/A | N/A | a.71.1 | Endoplasmic reticulum protein ERP29, C-domain |
| View | Download | 0.490 | N/A | N/A | a.29.6 | Description not found. |
| View | Download | 0.449 | N/A | N/A | a.118.13 | Arp2/3 complex 16 kDa subunit ARPC5 |
|
Region A: Residues: [380-452] |
1 11 21 31 41 51
| | | | | |
1 SGNDVFTALL LALPPQTWSG IKDQSLLQEM KQLISMVSHP TLLQQEVLHL RRQLEMLKRC 60
61 QENKEDEELS APA
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.842 | a.64.1 | Saposin |
| View | Download | 0.827 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.827 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.825 | a.159.2 | FF domain |
| View | Download | 0.814 | a.64.1 | Saposin |
| View | Download | 0.790 | a.4.1 | Homeodomain-like |
| View | Download | 0.780 | a.2.3 | Chaperone J-domain |
| View | Download | 0.780 | a.2.3 | Chaperone J-domain |
| View | Download | 0.734 | a.4.1 | Homeodomain-like |
| View | Download | 0.720 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
