| Protein: | C3H14_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 310 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for C3H14_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
156.0 | [0..16] | [300..58] |
|
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156.0 | [0..16] | [300..58] |
|
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155.0 | [0..13] | [301..12] |
|
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154.0 | [0..16] | [300..58] |
|
|
152.0 | [0..20] | [300..62] |
|
|
152.0 | [0..29] | [301..25] |
|
|
152.0 | [0..42] | [270..211] |
|
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150.0 | [0..42] | [264..224] |
|
|
150.0 | [0..42] | [279..211] |
|
Region A: Residues: [1-159] |
1 11 21 31 41 51
| | | | | |
1 MEKLAASTVT DLACVTAINS SPPPLSPISE QSFNNKHQEE FAASFASLYN SIFSPESLSP 60
61 SPPSSSSPPS RVDTTTEHRL LQAKLILEYD ELNEHYELCL NRLQSLMTEL DSLRHENDSL 120
121 RFENSDLLKL IRISTSSSSS VSPPAPIHNR QFRHQISDS
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [160-230] |
1 11 21 31 41 51
| | | | | |
1 RSAKRNNQER NSLPKSISVR SQGYLKINHG FEASDLQTSQ LSSNSVSSSQ KVCVVQTKGE 60
61 REALELEVYR Q
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.674 | b.122.1 | PUA domain-like |
| View | Download | 0.553 | d.58.48 | MTH1187-like |
| View | Download | 0.553 | d.58.48 | MTH1187-like |
| View | Download | 0.501 | b.1.20 | Tp47 lipoprotein, middle and C-terminal domains |
| View | Download | 0.501 | b.1.20 | Tp47 lipoprotein, middle and C-terminal domains |
| View | Download | 0.484 | b.1.2 | Fibronectin type III |
| View | Download | 0.484 | b.1.2 | Fibronectin type III |
| View | Download | 0.479 | g.7.1 | Snake toxin-like |
| View | Download | 0.335 | d.74.1 | Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) |
| View | Download | 0.283 | d.58.10 | Acylphosphatase-like |
|
Region A: Residues: [231-310] |
1 11 21 31 41 51
| | | | | |
1 GMMKTELCNK WQETGACCYG DNCQFAHGID ELRPVIRHPR YKTEVCRMMV TGAMCPYGHR 60
61 CHFRHSLTDQ ERMMMMMLTR
|
| Detection Method: | |
| Confidence: | 20.522879 |
| Match: | 1rgoA |
| Description: | Structural Basis for Recognition of the mRNA Class II AU-Rich Element by the Tandem Zinc Finger Domain of TIS11d |
Matching Structure (courtesy of the PDB): |
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