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View Structure Prediction Details

Protein: GPAT6_ARATH
Organism: Arabidopsis thaliana
Length: 501 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GPAT6_ARATH.

Description E-value Query
Range
Subject
Range
gi|56784423, gi|... - gi|56784423|dbj|BAD82462.1| phospholipid/glycerol acyltransferase-like protein [Oryza sativa Japonic...
315.0 [0..7] [499..3]

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Predicted Domain #1
Region A:
Residues: [1-233]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGAQEKRRRF EQISKCDVKD RSNHTVAADL DGTLLISRSA FPYYFLVALE AGSLLRALIL  60
   61 LVSVPFVYLT YLTISETLAI NVFVFITFAG LKIRDVELVV RSVLPRFYAE DVRPDTWRIF 120
  121 NTFGKRYIIT ASPRIMVEPF VKTFLGVDKV LGTELEVSKS GRATGFTRKP GILVGQYKRD 180
  181 VVLREFGGLA SDLPDLGLGD SKTDHDFMSI CKEGYMVPRT KCEPLPRNKL LSP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 28.30103
Match: 1f5sA
Description: Phosphoserine phosphatase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.02290994020378 bayes_pls_golite062009
hydrolase activity 0.71914501009647 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [234-501]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IIFHEGRLVQ RPTPLVALLT FLWLPVGFVL SIIRVYTNIP LPERIARYNY KLTGIKLVVN  60
   61 GHPPPPPKPG QPGHLLVCNH RTVLDPVVTA VALGRKISCV TYSISKFSEL ISPIKAVALT 120
  121 RQREKDAANI KRLLEEGDLV ICPEGTTCRE PFLLRFSALF AELTDRIVPV AINTKQSMFN 180
  181 GTTTRGYKLL DPYFAFMNPR PTYEITFLKQ IPAELTCKGG KSPIEVANYI QRVLGGTLGF 240
  241 ECTNFTRKDK YAMLAGTDGR VPVKKEKT

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.83
Match: 1k30A
Description: Glycerol-3-phosphate (1)-acyltransferase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle