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View Structure Prediction Details

Protein: SBT4F_ARATH
Organism: Arabidopsis thaliana
Length: 766 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SBT4F_ARATH.

Description E-value Query
Range
Subject
Range
gi|92869887 - gi|92869887|gb|ABE79364.1| Orn/DAP/Arg decarboxylase 2; Protease-associated PA; Proteinase inhibitor...
461.0 [0..3] [763..11]

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Predicted Domain #1
Region A:
Residues: [1-120]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSNQRVRLF MLCFCLVNNA VIAATEDENV ERKPYIVYMG EATENSLVEA AENHHNLLMT  60
   61 VIGDESKARE LKIYSYGKNI NGFVARLFPH EAEKLSREEG VVSVFKNTQR QLHTTRSWDF 120
  121 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 35.522879
Match: 1r6vA
Description: Crystal structure of fervidolysin from Fervidobacterium pennivorans, a keratinolytic enzyme related to subtilisin
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [121-766]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LGLVESKYKR SVGIESNIIV GVLDTGIDVE SPSFNDKGVG PPPAKWKGKC VTGNNFTRCN  60
   61 NKVIGAKYFH IQSEGLPDGE GDTAADHDGH GTHTSSTIAG VSVSSASLFG IANGTARGGV 120
  121 PSARIAAYKV CWDSGCTDMD MLAAFDEAIS DGVDIISISI GGASLPFFED PIAIGAFHAM 180
  181 KRGILTTCSA GNNGPGLFTV SNLAPWVMTV AANSLDRKFE TVVKLGNGLT ASGISLNGFN 240
  241 PRKKMYPLTS GSLASNLSAG GYGEPSTCEP GTLGEDKVMG KVVYCEAGRE EGGNGGQGQD 300
  301 HVVRSLKGAG VIVQLLEPTD MATSTLIAGS YVFFEDGTKI TEYINSTKNP QAVIFKTKTT 360
  361 KMLAPSISSF SARGPQRISP NILKPDISAP GLNILAAYSK LASVTGYPDD NRRTLFSIMS 420
  421 GTSMACPHAA AAAAYVKSFH PDWSPAAIKS ALMTTATPMR IKGNEAELSY GSGQINPRRA 480
  481 IHPGLVYDIT EDAYLRFLCK EGYNSTSIGL LTGDNSNNTT KKEYNCENIK RGLGSDGLNY 540
  541 PSLHKQVNST EAKVSEVFYR TVTNVGYGPS TYVARVWAPK GLRVEVVPKV MSFERPKEKR 600
  601 NFKVVIDGVW DETMKGIVSA SVEWDDSRGH LVRSPILLFR SDNDYR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 49.0
Match: 1xf1A
Description: Structure of C5a peptidase- a key virulence factor from Streptococcus
Matching Structure (courtesy of the PDB):

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