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View Structure Prediction Details

Protein: MTP1_ARATH
Organism: Arabidopsis thaliana
Length: 398 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MTP1_ARATH.

Description E-value Query
Range
Subject
Range
gi|4206640 - gi|4206640|gb|AAD11757.1| zinc transporter ZAT [Arabidopsis thaliana]
292.0 [0..1] [398..1]

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Predicted Domain #1
Region A:
Residues: [1-398]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESSSPHHSH IVEVNVGKSD EERIIVASKV CGEAPCGFSD SKNASGDAHE RSASMRKLCI  60
   61 AVVLCLVFMS VEVVGGIKAN SLAILTDAAH LLSDVAAFAI SLFSLWAAGW EATPRQTYGF 120
  121 FRIEILGALV SIQLIWLLTG ILVYEAIIRI VTETSEVNGF LMFLVAAFGL VVNIIMAVLL 180
  181 GHDHGHSHGH GHGHGHDHHN HSHGVTVTTH HHHHDHEHGH SHGHGEDKHH AHGDVTEQLL 240
  241 DKSKTQVAAK EKRKRNINLQ GAYLHVLGDS IQSVGVMIGG AIIWYNPEWK IVDLICTLAF 300
  301 SVIVLGTTIN MIRNILEVLM ESTPREIDAT KLEKGLLEME EVVAVHELHI WAITVGKVLL 360
  361 ACHVNIRPEA DADMVLNKVI DYIRREYNIS HVTIQIER

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 38.09691
Match: 2qfiA
Description: No description for 2qfiA was found.

Predicted functions:

Term Confidence Notes
transporter activity 0.0225298510244101 bayes_pls_golite062009
transmembrane transporter activity 0.00888573638791978 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle