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View Structure Prediction Details

Protein: UBP4_ARATH
Organism: Arabidopsis thaliana
Length: 365 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for UBP4_ARATH.

Description E-value Query
Range
Subject
Range
gi|114649194 - gi|114649194|ref|XP_001135418.1| PREDICTED: hypothetical protein [Pan troglodytes]
295.0 [0..1] [363..319]

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Predicted Domain #1
Region A:
Residues: [1-365]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGAAGSKLEK ALGDQFPEGE RYFGFENFGN TCYCNSVLQA LYFCAPFREQ LLEHYANNKA  60
   61 DAEENLLTCL ADLFSQISSQ KKKTGVIAPK RFVQRLKKQN ELFRSYMHQD AHEFLNYLLN 120
  121 ELVEILEKET QATKADNETS SSPEKIANVL KAPLANGVHK EPIVTWVHKI FQGILTNETR 180
  181 CLRCETVTAR DETFLDLSLD IEQNSSITSC LKNFSSTETL HAEDKFFCDK CCSLQEAQKR 240
  241 MKIKKPPHIL VIHLKRFKYM EQLGRYKKLS YRVVFPLELK LSNTVDEYVD IEYSLFAVVV 300
  301 HVGSGPNHGH YVSLVKSHNH WLFFDDESVE IIEESAVQTF FGSSQEYSSN TDHGYILLYE 360
  361 SLGTR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 60.221849
Match: 2ibiA
Description: No description for 2ibiA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle