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View Structure Prediction Details

Protein: RLF34_ARATH
Organism: Arabidopsis thaliana
Length: 129 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RLF34_ARATH.

Description E-value Query
Range
Subject
Range
gi|21593826 - gi|21593826|gb|AAM65793.1| unknown [Arabidopsis thaliana]
155.0 [0..16] [129..16]

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Predicted Domain #1
Region A:
Residues: [1-129]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASSLNLLL ILSLLTFISL QRSESLSDNP SLTLLPDGFD WPISHSDEFD IIDGEESFEV  60
   61 TEEDDGVTDR RSLYWRRTKY YISYGALSAN RVPCPPRSGR SYYTHNCFRA RGPVHPYSRG 120
  121 CSSITRCRR

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 33.318759
Match: PF05498.2
Description: No description for PF05498.2 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.252 N/A N/A a.163.1 Crustacean CHH/MIH/GIH neurohormone
View Download 0.226 N/A N/A d.15.6 Superantigen toxins, C-terminal domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle