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View Structure Prediction Details

Protein: BRT1_ARATH
Organism: Arabidopsis thaliana
Length: 392 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BRT1_ARATH.

Description E-value Query
Range
Subject
Range
gi|114674911 - gi|114674911|ref|XP_524071.2| PREDICTED: solute carrier family 25, member 23 [Pan troglodytes]
296.0 [0..66] [385..322]

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Predicted Domain #1
Region A:
Residues: [1-102]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKTGIQLFD DSRNGFFSVS DLGFDSSLNS SNYHPIGGLF ASVNQTNPFA SLSSSDLSNR  60
   61 GNNSFSTQLN DLYTKYMPGK EEEEEVVNGE KRKRKKKGGL TL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [103-392]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KIKIANPSLR RLLSGAVAGA VSRTVVAPLE TIRTHLMVGS GGNSSTEVFS DIMKHEGWTG  60
   61 LFRGNLVNVI RVAPARAVEL FVFETVNKKL SPPHGQESKI PIPASLLAGA CAGVSQTLLT 120
  121 YPLELVKTRL TIQRGVYKGI FDAFLKIIRE EGPTELYRGL APSLIGVVPY AATNYFAYDS 180
  181 LRKAYRSFSK QEKIGNIETL LIGSLAGALS STATFPLEVA RKHMQVGAVS GRVVYKNMLH 240
  241 ALVTILEHEG ILGWYKGLGP SCLKLVPAAG ISFMCYEACK KILIENNQEA 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 72.39794
Match: 1okcA
Description: structure of mitochondrial ADP/ATP carrier in complex with carboxyatractyloside
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle