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View Structure Prediction Details

Protein: MRS25_ARATH
Organism: Arabidopsis thaliana
Length: 421 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MRS25_ARATH.

Description E-value Query
Range
Subject
Range
gi|25360882 - gi|25360882|gb|AAN73215.1| MRS2-5 [Arabidopsis thaliana]
347.0 [0..1] [421..1]

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Predicted Domain #1
Region A:
Residues: [1-112]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGEQLDPFSA SNLPDFISSQ KIGRPVNFEG QTNRGHPFSG LKKRGQSSRS WVKIDQDGNS  60
   61 AVLELDKATI MKRCSLPSRD LRLLDPLFIY PSSILGRERA IVVSLEKIRC II

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [113-421]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TAEEVILMNA RDASVVQYQS ELCKRLQSNH NLNVKDDLPF EFKALELVLE LSCLSLDAQV  60
   61 NELEMEVYPV LDELATNIST LNLEHVRRLK GRLLTLTQKV QKVCDEIEHL MDDDDDMAEM 120
  121 YLTEKKERAE AHASEELEDN IGEDFESSGI VSKSAPVSPV GSTSGNFGKL QRAFSSIVGS 180
  181 HKSLLSSSSI GENIDQLEML LEAYFVVVDN TLSKLSSLKE YIDDTEDLIN IKLGNVQNQL 240
  241 IQFQLLLTAA TFVAAIFAAV TAVFGMNLQD SVFQNPTTFQ YVLLITGIGC GFLYFGFVLY 300
  301 FKHKKVFPL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 55.045757
Match: 2bbjA
Description: Crystal structure of the CorA Mg2+ transporter
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle