| Protein: | Y4094_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 441 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Y4094_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
455.0 | [0..1] | [441..1] |
|
Region A: Residues: [1-254] |
1 11 21 31 41 51
| | | | | |
1 MGLSNDRIKF NVGGRIFETT ATTLANAGRD SFFGALFDEN WNLSQPGDLF IDRNPDCFAV 60
61 LLDLLRTGDL NIPPNIPERL LHKEAMFYGL IDHLRTAKWG PFDGNRLHLS RSVTGIAPGD 120
121 GTAIRAGPDG GCCIAHGSVV HVFDWMLEEH PTINLDYQRV NDVGWIDSGN IVLSACERLG 180
181 RGDGGMGLFS SSSGELRYKF QVSHDNQVKS YSAGALSFSP DSKIFTSCKG RSNEYGIGVW 240
241 DQSTGKQVDF FYES
|
| Detection Method: |  |
| Confidence: | 48.522879 |
| Match: | 2a79B |
| Description: | Mammalian Shaker Kv1.2 potassium channel- beta subunit complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [255-441] |
1 11 21 31 41 51
| | | | | |
1 PGWSLGDADK LQWLSGKNCL LVATLFPRKD NCYISLLDFR EKNMVWSWSD IGFLTMAEEK 60
61 RVRDAIAMEE SNSICVVNEF EDLGFIDLRM DGGGSSVRWS SRSRLMKSKM PDEPCYPKLA 120
121 LHEGQLFSSM NDSISVFCGS DWVLTSRLKR SYGGSICDFS IGGDRLFALH SEENVFDVWE 180
181 TLPPPII
|
| Detection Method: | |
| Confidence: | 0.962 |
| Match: | 2fawA |
| Description: | No description for 2fawA was found. |
