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View Structure Prediction Details

Protein: SC13B_ARATH
Organism: Arabidopsis thaliana
Length: 302 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SC13B_ARATH.

Description E-value Query
Range
Subject
Range
gi|186464325, gi... - gi|23128981|ref|ZP_00110817.1| COG2319: FOG: WD40 repeat [Nostoc punctiforme PCC 73102], gi|18668187...
295.0 [0..3] [300..1164]

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Predicted Domain #1
Region A:
Residues: [1-302]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPGQKIETGH EDIVHDVQMD YYGKRIATAS SDCTIKITGV SNNGGSQQLA TLTGHRGPVW  60
   61 EVAWAHPKYG SILASCSYDG QVILWKEGNQ NQWTQDHVFT DHKSSVNSIA WAPHDIGLSL 120
  121 ACGSSDGNIS VFTARADGGW DTSRIDQAHP VGVTSVSWAP ATAPGALVSS GLLDPVYKLA 180
  181 SGGCDNTVKV WKLANGSWKM DCFPALQKHT DWVRDVAWAP NLGLPKSTIA SGSQDGKVII 240
  241 WTVGKEGEQW EGKVLKDFMT PVWRVSWSLT GNLLAVSDGN NNVTVWKEAV DGEWEQVTAV 300
  301 EP

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Detection Method: PSI-BLAST
Confidence: 46.0
Match: 2pm6B
Description: No description for 2pm6B was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle