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View Structure Prediction Details

Protein: ALS3_ARATH
Organism: Arabidopsis thaliana
Length: 273 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ALS3_ARATH.

Description E-value Query
Range
Subject
Range
gi|82542985, gi|... - gi|82542985|ref|YP_406932.1| putative metal resistance protein [Shigella boydii Sb227], gi|81244396|...
292.0 [0..24] [265..19]

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Predicted Domain #1
Region A:
Residues: [1-75]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLKWDDFFN DYEWLIVFLK GMVKPAAALV VVLLAVILSY SQNLSLEGEM IYSVSRSFLQ  60
   61 LSVIGFVLQF IFNQE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [76-150]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NSGWIILAYL FMVSVAGYTA GQRARHVPRG KYVAGLSILA GTSITMFLLV LLNVFPFTPR  60
   61 YMIPIAGMLV GNAMT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [151-273]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VTGVTMKQLR DDIKMQLNLV ETALALGATP RQATLQQVKR ALVISLSPVL DSCKTVGLIS  60
   61 LPGAMTGMIM GGASPLEAIQ LQIVVMNMMV GAATVSSITS TYLCWPSFFT KAYQLQTHVF 120
  121 SSD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle