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View Structure Prediction Details

Protein: ZIP2_ARATH
Organism: Arabidopsis thaliana
Length: 353 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ZIP2_ARATH.

Description E-value Query
Range
Subject
Range
gi|3252868, gi|2... - gi|3252868|gb|AAC24198.1| putative zinc transporter [Arabidopsis thaliana], pir||T52184 zinc transpo...
227.0 [0..1] [353..1]

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Predicted Domain #1
Region A:
Residues: [1-190]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALSSKTLKS TLFFLSIIFL CFSLILAHGG IDDGDEEEET NQPPPATGTT TVVNLRSKSL  60
   61 VLVKIYCIII LFFSTFLAGV SPYFYRWNES FLLLGTQFSG GIFLATALIH FLSDANETFR 120
  121 GLKHKEYPYA FMLAAAGYCL TMLADVAVAF VAAGSNNNHV GASVGESRED DDVAVKEEGR 180
  181 REIKSGVDVS 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [191-255]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QALIRTSGFG DTALLIFALC FHSIFEGIAI GLSDTKSDAW RNLWTISLHK VFAAVAMGIA  60
   61 LLKLI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [256-353]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PKRPFFLTVV YSFAFGISSP IGVGIGIGIN ATSQGAGGDW TYAISMGLAC GVFVYVAVNH  60
   61 LISKGYKPRE ECYFDKPIYK FIAVFLGVAL LSVVMIWD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle