YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: Y2979_ARATH
Organism: Arabidopsis thaliana
Length: 240 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Y2979_ARATH.

Description E-value Query
Range
Subject
Range
YB95_ARATH - Uncharacterized protein At2g39795, mitochondrial OS=Arabidopsis thaliana GN=At2g39795 PE=2 SV=1
272.0 [0..1] [239..1]

Back

Predicted Domain #1
Region A:
Residues: [1-240]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFAWCVRRS ASKLASACGQ ARSISAVVNR PSLALNPSPL SPFVSRGFLY TMAVDKLSSE  60
   61 QTLHLVIDSE LNSALQTDDP NLNEEMAPGS FPLKIRDKPG DQSVTLTAYY NDERIHVDVG 120
  121 MPYLGDDVID VFGPNNDELS FPLVVTVIKK NGVSIEFTCQ AYADYIDLTD LTVHDYQYQM 180
  181 GETDWPRFKN LDDNLKKAFH RYLATRLDAN ITKLLHKYMV SKIKREYLLW LKNVNKFVDG 240
  241 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 45.69897
Match: 1p32A
Description: Acidic mitochondrial matrix protein p32
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle