| Protein: | PDRP1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 403 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PDRP1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
523.0 | [0..1] | [403..1] |
|
|
467.0 | [0..14] | [403..37] |
|
|
458.0 | [0..8] | [403..33] |
|
|
360.0 | [0..114] | [390..2] |
|
|
359.0 | [0..112] | [390..1] |
|
|
358.0 | [0..114] | [394..6] |
|
|
358.0 | [0..115] | [394..55] |
|
|
356.0 | [0..114] | [398..6] |
|
Region A: Residues: [1-111] |
1 11 21 31 41 51
| | | | | |
1 MALLSAMKLQ GRPPPISSNL NPNSKPAGSD SVSLNASEPG SERKPRKFSS QLNRWNRART 60
61 LRSGAKLDST ITNGSNNTTG PMRPIESSSR TDVSTLDSDV SSSSNGVSEA D
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.372 | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.372 | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.361 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.331 | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.305 | d.169.1 | C-type lectin-like |
| View | Download | 0.299 | a.24.15 | FAD-dependent thiol oxidase |
| View | Download | 0.245 | a.130.1 | Chorismate mutase II |
|
Region A: Residues: [112-233] |
1 11 21 31 41 51
| | | | | |
1 MTAAKSIYIV SDGTGWTAEH AVNAALGQFD YCLVDRGCPV NTHLFSGIED GEKLMEIIKQ 60
61 AAREGAMVIY TLADPSMAEA TMRACKLWKI PSLDILGPIT ESISSHLGTN PSGLSRGITN 120
121 SS
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.947 | N/A | N/A | c.61.1 | PRTase-like |
| View | Download | 0.850 | N/A | N/A | c.78.2 | Aspartate/glutamate racemase |
| View | Download | 0.850 | N/A | N/A | c.78.2 | Aspartate/glutamate racemase |
| View | Download | 0.801 | N/A | N/A | c.46.1 | Rhodanese/Cell cycle control phosphatase |
| View | Download | 0.782 | N/A | N/A | c.57.1 | Molybdenum cofactor biosynthesis proteins |
| View | Download | 0.768 | N/A | N/A | c.55.5 | MTH1175-like |
| View | Download | 0.748 | N/A | N/A | c.78.2 | Aspartate/glutamate racemase |
| View | Download | 0.717 | N/A | N/A | c.23.13 | Type II 3-dehydroquinate dehydratase |
| View | Download | 0.690 | N/A | N/A | c.48.1 | TK C-terminal domain-like |
|
Region A: Residues: [234-403] |
1 11 21 31 41 51
| | | | | |
1 LNEDYFKRIE AIEFTIKHDD GALPENLEKA DIVLVGVSRT GKTPLSTYLA QKGYKVSNVP 60
61 IVNGVDLPKT LFEIDPRKVF GLMINPLVLQ GIREARAKSL GLGSSFKTKY SELGSVKEEL 120
121 ELAKKIFAEN PTWPVIEVTE SAIEETAAVV LRLYDERQSN RAMPRISKSY
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
